BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034A01SP1|AL429828
(856 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1776 1669 0.0
>3x_Contig1776
Length = 26138
Score = 1669 bits (842), Expect = 0.0
Identities = 856/858 (99%), Gaps = 2/858 (0%)
Strand = Plus / Plus
Query: 1 gatcaagggaatc-aattccaacagcatgggtgacc-ggagtcacccagcatcccatcga 58
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 18904 gatcaagggaatccaattccaacagcatgggtgacccggagtcacccagcatcccatcga 18963
Query: 59 caagtaggttactcaatgtggcaataaccaaagtgagaagaggtgaagatagcactgcag 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18964 caagtaggttactcaatgtggcaataaccaaagtgagaagaggtgaagatagcactgcag 19023
Query: 119 cgcgatagaacagtatatatttatctatcggagattttctggttcatcatctttcataaa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19024 cgcgatagaacagtatatatttatctatcggagattttctggttcatcatctttcataaa 19083
Query: 179 atacatatcgtaatgtaatttacagcctgggttgaattgcgatctgcaattcggacattg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19084 atacatatcgtaatgtaatttacagcctgggttgaattgcgatctgcaattcggacattg 19143
Query: 239 caacgaatcactgtatgcagcaaacgacatttcaagtttgcatacgccgcatatgaccaa 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19144 caacgaatcactgtatgcagcaaacgacatttcaagtttgcatacgccgcatatgaccaa 19203
Query: 299 cgggacagtttcgtcgtttatattgtacctttctgtgacgtgcggtaccaattcctggtg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19204 cgggacagtttcgtcgtttatattgtacctttctgtgacgtgcggtaccaattcctggtg 19263
Query: 359 acactcgtaacatgcatagtatccgttacagcatttgaaccggagggctataacgtccag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19264 acactcgtaacatgcatagtatccgttacagcatttgaaccggagggctataacgtccag 19323
Query: 419 tggaccgtgccagtgttcacaccgactttctttatccacaagtttcccatatatctgtgc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19324 tggaccgtgccagtgttcacaccgactttctttatccacaagtttcccatatatctgtgc 19383
Query: 479 tttttccatggagatgggtgaccagttatactgcagtatacaattcttaaatatgaaagt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19384 tttttccatggagatgggtgaccagttatactgcagtatacaattcttaaatatgaaagt 19443
Query: 539 aatatactctcaaatcctcgatattgagtatgggatggttaacagctttcaatttgaatg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19444 aatatactctcaaatcctcgatattgagtatgggatggttaacagctttcaatttgaatg 19503
Query: 599 ttttcgaatttaaactatgtgggaaaaaaaaagtagtgtggaaagaatatacataaatat 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19504 ttttcgaatttaaactatgtgggaaaaaaaaagtagtgtggaaagaatatacataaatat 19563
Query: 659 ataaatgaatcgttaatttatagatgattttaagttattttaagtgcatgaagatgatcc 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19564 ataaatgaatcgttaatttatagatgattttaagttattttaagtgcatgaagatgatcc 19623
Query: 719 cgtcttgcggaatatatatatatgatccagagagacctcttttgatgtctctttcatttt 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19624 cgtcttgcggaatatatatatatgatccagagagacctcttttgatgtctctttcatttt 19683
Query: 779 attagttaccggtgacgaatttttgacccttttcaatgttcttcttcaaagtttccttac 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19684 attagttaccggtgacgaatttttgacccttttcaatgttcttcttcaaagtttccttac 19743
Query: 839 atttggccaacatttctt 856
||||||||||||||||||
Sbjct: 19744 atttggccaacatttctt 19761
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,013
Number of Sequences: 1807
Number of extensions: 10013
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 856
length of database: 10,358,551
effective HSP length: 16
effective length of query: 840
effective length of database: 10,329,639
effective search space: 8676896760
effective search space used: 8676896760
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)